Insertion junction: CLIP2.001964_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001964
Chromosome:chromosome 6
Location:2238017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g266850 (1 of 1) PTHR10071:SF199 - GATA-BINDING PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTAGCCGCCCAACCCTCCGGCGGTCGGTGTCGTTTGAATTTTGCGCAA
Internal bar code:GCTCCCAAGGGCCACATAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1719
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCGACATCTCTCTTCCG
Suggested primer 2:CTTAATGTCCGCTTGCGAGC