Insertion junction: CLIP2.001966_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001966
Chromosome:chromosome 1
Location:2595754
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015350 POR1,POR Light-dependent protochlorophyllide reductase; (1 of 1) K00218 - protochlorophyllide reductase (E1.3.1.33, por) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTACCCGCGCATGCTACATACAGCAGCATAAGATTATTGAAGTGCGTG
Internal bar code:GTAGACGATATGCACTGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3133
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GACATCTCTGCCAAGCTGGT
Suggested primer 2:GCGTCTTGTGGTGTTGGTTC