Insertion junction: CLIP2.001973_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001973
Chromosome:chromosome 16
Location:1939240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656200 (1 of 1) PF00612//PF13424 - IQ calmodulin-binding motif (IQ) // Tetratricopeptide repeat (TPR_12) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTCGCTCATGGACGTGTCCCGAATGACAGCTGTAAGTGTGCCTGCCC
Internal bar code:GGGAGAGGAGTGTCTGTGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1611
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTGGACTTGGTGTCGC
Suggested primer 2:GCAGCGGCTCATACACAATG