Insertion junction: CLIP2.001974_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001974
Chromosome:chromosome 16
Location:2477071
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660390 CSR1 (1 of 1) PF00415//PF00685 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // Sulfotransferase domain (Sulfotransfer_1); Carbohydrate sulfotransferase-related 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTGGTGCTGTCCAGCCAGGAGCTGGGGCGTGTGTTTATGTGTGCATG
Internal bar code:CTGCAGGCCAGGGAATGGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1567
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGGGAGAGTCTGCGAA
Suggested primer 2:TCACGAGATCGCAACACACA