Insertion junction: CLIP2.001976_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001976
Chromosome:chromosome 11
Location:2336563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095133 (1 of 1) PTHR14194//PTHR14194:SF44 - NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCCCTAGGCTTGAACCACGCACCCTGCCACCACGGCCCTGCTTGCTG
Internal bar code:GTAGCAGGTTCACCCGACTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3800
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACTGCAGGTGGTTTGTG
Suggested primer 2:GCGTACGGTAGCTGCATTTG