Insertion junction: CLIP2.001981_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001981
Chromosome:chromosome 2
Location:2857826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094750 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGTCATTCGCGAGACAGCTCCCATGGCTAAGGGGCTTACCTGCTGCT
Internal bar code:TTGTTAATTCTAAGAGTGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1151
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGCTGAATGTTAGAAGC
Suggested primer 2:GAAGGAAACACCGCAAACCC