Insertion junction: CLIP2.001982_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001982
Chromosome:chromosome 1
Location:877476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g005001 CPLD9 Conserved in the Plant Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGATTCCAGCGCTGCATCGACCGCAGGCCACTGGGACGGCAGGTGGCCTT
Internal bar code:CTAAGGTGTCAGTAGGTAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3080
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTATACCCTGCGCAACG
Suggested primer 2:CTCACCTGCCAAAAAGCACC