Insertion junction: CLIP2.001991_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001991
Chromosome:chromosome 3
Location:6745419
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196350 (1 of 3) K09858 - SEC-C motif domain protein (K09858) 3'UTR
Cre03.g196400 EPC1 (1 of 1) K11322 - enhancer of polycomb-like protein (EPC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCTCCAACACTCGGCCCAACCAAACCTGCAGCTAGCACCTTGCACG
Internal bar code:TACTGTAGTGCACAGTGTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3541
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:113
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTATAGTGGCAGACCCCT
Suggested primer 2:AAGGGAGGTGTAACGGCATG