Insertion junction: CLIP2.001993_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001993
Chromosome:chromosome 6
Location:3718778
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278159 CRCO,CO,CON1,CONSTANS CONSTANS-like protein involved in circadian rhythms; (1 of 1) PF00643//PF06203 - B-box zinc finger (zf-B_box) // CCT motif (CCT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCAGCTTCAAGCTCGGCCCTGCCAGCGAGGGCACCTGGCCTGATCCT
Internal bar code:AATGAACAAAGCCTTGGTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1968
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGACAGCAGTGTACGTG
Suggested primer 2:CATGCGTAAGGGAATGCAGC