Insertion junction: CLIP2.002017_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002017
Chromosome:chromosome 5
Location:809656
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g245900 BCA2 (1 of 1) PTHR11825//PTHR11825:SF46 - SUBGROUP IIII AMINOTRANSFERASE // BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 3, CHLOROPLASTIC; Branched-chain amino acid aminotransferase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACCCTTCAAAGCCGAGCTCGAATCTTGACACGGGCCCTGTCAAGCAA
Internal bar code:TGATCATGTCAGACAGCACGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:463
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGCGGGTCTCTACTGAA
Suggested primer 2:TGTTCCCCACGCTTTCCTAC