Insertion junction: CLIP2.002028_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002028
Chromosome:chromosome 2
Location:1269633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082050 (1 of 1) K13115 - coiled-coil domain-containing protein 130 (CCDC130) 3'UTR
Cre02.g082100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCATGGGTCAGCGCGCCTAGTCCTGCTTGGCAGCGGCACGAGATAGA
Internal bar code:TCGGACTTCTGTGTGGATCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3472
LEAP-Seq percent confirming:76.7742
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:155

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTTTCGGAGGTAGGGG
Suggested primer 2:TGAATACGGTGTCGCGAACA