Insertion junction: CLIP2.002032_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002032
Chromosome:chromosome 1
Location:318108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001750 TIG1 chloroplast trigger factor; (1 of 1) PTHR30560 - TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAATCCGGAGGTGGGCGTCCGGAGCCGGTAATGAGCGCGCCGAAGGCG
Internal bar code:CGAGATACGTCGAAAGAAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1476
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCTCCATGCTTTCAGCT
Suggested primer 2:CTAAGGTGGGAACAGGGCTG