Insertion junction: CLIP2.002041_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002041
Chromosome:chromosome 5
Location:2176720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237350 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGTAGCAAGAAGGGACAAGGCATTGGTGCGTCGTTCGCGCGCTGTTA
Internal bar code:ACGCCTGGCCCTAAGTGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2181
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCGGTCGGGACTTACCA
Suggested primer 2:CCTTCTGAGCAGGAACCAGG