Insertion junction: CLIP2.002041_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002041
Chromosome:chromosome 5
Location:2176720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237350 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGTGGGCACGGGTGGGAGCCACACACATCGGGACTACGCTTTCCTGC
Internal bar code:ACGCCTGGCCCTAAGTGATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3046
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCTGAGCAGGAACCAGG
Suggested primer 2:ATCTCGGTCGGGACTTACCA