Insertion junction: CLIP2.002042_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002042
Chromosome:chromosome 16
Location:5712991
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680800 CGL155 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain; Conserved in the Green Lineage 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCTCCAGGGGCACCCCAGTGTGGAAGGCTATCTTCATTCGTGTTAGT
Internal bar code:GCCTTTTCGTTGTCCGCATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4254
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CATCATCGAGCTGCAGTTGC
Suggested primer 2:GTGCGTGATCGATGGCTAGA