Insertion junction: CLIP2.002043_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002043
Chromosome:chromosome 2
Location:3630790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099850 PDC2 (1 of 1) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC; Pyruvate dehydrogenase, E1 component, alpha subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTCGCCCTCGGTTTCTCGCCCGGCCTTGGCGATCGACAGGCGCCCA
Internal bar code:GGGGGCCTGGCGAATAGACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:737
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCGGTTTCCTGCTTTGC
Suggested primer 2:CGCAGTCTGCTACGCAAATC