Insertion junction: CLIP2.002051_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002051
Chromosome:chromosome 2
Location:4377566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105450 CGL141 (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATTGAGCTCCTTGCTGGAGGGGCCGGCGGCGCGGGCCTTGCGGCTGT
Internal bar code:CCGACAGACGATAGCAGTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:345
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGCTCCCTCACCCTCAT
Suggested primer 2:CCCTGGACAGCGGTTACAAT