Insertion junction: CLIP2.002051_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002051
Chromosome:chromosome 2
Location:4377566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105450 CGL141 (1 of 1) PTHR36749:SF1 - F7O18.3 PROTEIN; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACCACCTCCTTTGAGCGCGCGCGCAGCGAGTGGAGCCGCGCCAAGGT
Internal bar code:CCGACAGACGATAGCAGTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGGACAGCGGTTACAAT
Suggested primer 2:ATCTGCTCCCTCACCCTCAT