Insertion junction: CLIP2.002055_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002055
Chromosome:chromosome 6
Location:5536512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286800 HBP1 Histone gene transcript 5' hairpin-binding protein; (1 of 1) K18710 - histone RNA hairpin-binding protein (SLBP) 3'UTR
Cre06.g286850 (1 of 1) 1.1.1.193 - 5-amino-6-(5-phosphoribosylamino)uracil reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACCGTATCATCCCACCTCACAGCTGCTTAACGTCATCACCACAACCTC
Internal bar code:GCGTATAAACAGAATGTGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1783
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGTGTCAAAGCCGTTGC
Suggested primer 2:TTTGCAAGAGGGCCATTTGC