Insertion junction: CLIP2.002058_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002058
Chromosome:chromosome 12
Location:9193910
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g543303 CGLD20,CGLD6 conserved protein with COG5222 RING zinc finger domain; (1 of 1) PF08783 - DWNN domain (DWNN) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGGCTCATCCGAGCCACCACCGCCCCCGCCACGCCGTGCTGCGCCA
Internal bar code:CACTTGGGAGGCGACCACGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3202
LEAP-Seq percent confirming:0.588235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:169
LEAP-Seq n unique pos:170

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGTACTCCAAAGGGAAC
Suggested primer 2:AAGCCCTCCAAACAGATCGG