Insertion junction: CLIP2.002059_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002059
Chromosome:chromosome 2
Location:5142058
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111650 CGL8 (1 of 2) PTHR10783//PTHR10783:SF44 - XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED // SPX DOMAIN-CONTAINING PROTEIN 1-RELATED; SPX containing protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACAAGCGCACCGGCCTGCTGCTGCGCGCGCCCCAGCTGGGAGACCTG
Internal bar code:CAGCCCGCACGGTGTGGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1211
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTCTACTGTGTCCTGCG
Suggested primer 2:GAGACCTGCGTCATTCAGCT