Insertion junction: CLIP2.002062_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002062
Chromosome:chromosome 6
Location:2020076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265550 CDPK12 (1 of 1) PF07714//PF13202 - Protein tyrosine kinase (Pkinase_Tyr) // EF hand (EF-hand_5); Calcium/calmodulin-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACCCTGGCTTGGACCTTGAATACCTGACGCGTGTCAGTGACACATGCC
Internal bar code:AGCCGAGCTGCGTTTGGGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:6442
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:135
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:135

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACGCAACGATGTCTCCA
Suggested primer 2:CTTTGCAACTTGCTCGTGCT