Insertion junction: CLIP2.002064_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002064
Chromosome:chromosome 7
Location:690052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317350 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGTGAGGAGCACACAAGAACCAGCACGGAGGGAGGTGTCCTGAAGTA
Internal bar code:AACTAGTCATTGCGGAATGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2687
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAATGTTTCAGGCATGCC
Suggested primer 2:CGCAAGCACTGACATATGGC