Insertion junction: CLIP2.002079_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002079
Chromosome:chromosome 1
Location:2749739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016570 (1 of 1) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR016024//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Armadillo-type fold // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAGATTGGTTCAACGTTAACCCCCACCCCACCCAGGGTGGGCCCGGTT
Internal bar code:GCACTTCGTACGTGTGGTCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:386
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AACCGCGCTGAACTATTGGA
Suggested primer 2:GTGCCGAGTGAGGTGTGTTA