Insertion junction: CLIP2.002083_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002083
Chromosome:chromosome 3
Location:1478223
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151400 (1 of 1) K05643 - ATP-binding cassette, subfamily A (ABC1), member 3 (ABCA3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGTTTACAAACACGGGTGTCACGGCTCCCCGCACCCACCTGCAGCA
Internal bar code:TAAGTAGTGGTAAGGCTCTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:800
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCCCTCGCATGTCACAC
Suggested primer 2:GGAAGGGGGTGCATTCATCA