Insertion junction: CLIP2.002093_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002093
Chromosome:chromosome 3
Location:3174969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g165000 EFG10,LPA1 (1 of 1) K03596 - GTP-binding protein LepA (lepA); Translation elongation factor EFG/EF2, LepA-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCAGAGGGGCGGGGAGAGTGTGAGCAGCGAGGCTGGGCTGCGGCCG
Internal bar code:GAGACTAGATACGAATAGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:114
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACCTTGTGAAGCTGGAG
Suggested primer 2:CCGGCAATAGACATGCAAGC