Insertion junction: CLIP2.002096_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002096
Chromosome:chromosome 14
Location:855250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613050 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGAAGGTCTTCAGGTTTGCTCCATGGCGCCATGATTTGCTTGAGCGT
Internal bar code:CAAGTTTTCATTCTTTACAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1384
LEAP-Seq percent confirming:97.0
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTGTTGCTTTGACCACG
Suggested primer 2:CGCGTGTCGTGTTGAGTTTT