Insertion junction: CLIP2.002107_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002107
Chromosome:chromosome 17
Location:3050314
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAATTGAAACGGGGTGTCCAGGGGCATTCCTGCACACCGTACGTCTCT
Internal bar code:TGTACGCCTGAGCTGTTTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2396
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AGACGTGCCATCACACACAT
Suggested primer 2:CACGAGTGGTAGGAGATCGC