Insertion junction: CLIP2.002109_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002109
Chromosome:chromosome 12
Location:9201622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543100 (1 of 1) K03256 - tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit (TRM6, GCD10) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCCCCAACCCAGGTGTTAGTGGTCGAGCACTGTCTTGGGCTGGTGAC
Internal bar code:ATAAGGTTTAAGGAATTTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3138
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACAGGCAGCAGTCAAAG
Suggested primer 2:CATGATCTCGGAGGTGAGGC