Insertion junction: CLIP2.002110_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002110
Chromosome:chromosome 2
Location:2013697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088450 CPLD29 Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR22999:SF18 - PX DOMAIN-CONTAINING PROTEIN KINASE-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGAGCAATGCTGCGCCGTCTTGGCCCGGGTCAGATTTGCCGCCGGGG
Internal bar code:GTCCTTGGGTGTGTAGAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:677
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCTGCTGGTTCTAGT
Suggested primer 2:GACTTTCAGCGCTGTCCTCT