Insertion junction: CLIP2.002110_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002110
Chromosome:chromosome 2
Location:2013703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088450 CPLD29 Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR22999:SF18 - PX DOMAIN-CONTAINING PROTEIN KINASE-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGGGACGCAGCCCTCAGCCCAGCTTTACGACAGCTGGCGCCGCCGGC
Internal bar code:ACTCTCCGTAGGGTTGTTGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4338
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTTCAGCGCTGTCCTCT
Suggested primer 2:CTGCTGCTGCTGGTTCTAGT