Insertion junction: CLIP2.002111_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002111
Chromosome:chromosome 13
Location:1281565
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570851 PSB34 PSII assembly protein; (1 of 1) PTHR35753//PTHR35753:SF1 - FAMILY NOT NAMED // PROLINE-RICH FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTTGAGTCCACGGCACATACCGTAGACGCGGTCCGGCACACGCACACA
Internal bar code:AGCTGCGTATATATACTTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACGACTCGCTGTCATCC
Suggested primer 2:CAACAGGTGAAGCCAACGTG