Insertion junction: CLIP2.002112_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002112
Chromosome:chromosome 2
Location:3473255
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098950 SYP72 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATGCCGTATCAAGCACAGCCTTCTGATGTGTAGACACACGCGCATTAA
Internal bar code:TTATTCAGATCTAAGTTATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1447
LEAP-Seq percent confirming:94.3396
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAAAGTGCCAGACCCCA
Suggested primer 2:GTTCTGTTCCAAACGTGCCC