Insertion junction: CLIP2.002118_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002118
Chromosome:chromosome 12
Location:3140844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500650 RNB2 (1 of 1) PTHR23355//PTHR23355:SF39 - RIBONUCLEASE // SUBFAMILY NOT NAMED; chloroplast RNase II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACTTGATTCCCTGGTTTTTGTCATTCCGCCGCTCCACACCTCGACGC
Internal bar code:ATTTCATCCAGGAGCAGGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:882
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCTATACGTCAGTGGAC
Suggested primer 2:CTCCTGTATCCCATGCGACC