Insertion junction: CLIP2.002138_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002138
Chromosome:chromosome 6
Location:2025892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g265550 CDPK12 (1 of 1) PF07714//PF13202 - Protein tyrosine kinase (Pkinase_Tyr) // EF hand (EF-hand_5); Calcium/calmodulin-dependent protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATTATTGCCACATTGTGTGCATACAGCCGCGGGCCACAAAACCAAGTC
Internal bar code:AGTGATACGTAATATACTCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3262
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCGAGTAGACAATCGCT
Suggested primer 2:GTATCAGGAAGCCCGGGAAG