Insertion junction: CLIP2.002147_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002147
Chromosome:chromosome 17
Location:3532026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724600 PAO2,TIC55-2 Pheophorbide a oxygenase-related protein; (1 of 3) K13071 - pheophorbide a oxygenase (PAO, ACD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGACAATTTTCCATAGGGATCTGGACAGCTGCCTTCTGACAATCAAGA
Internal bar code:GATTTTAGTTTGGTAAAAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5643
LEAP-Seq percent confirming:90.7895
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGGTTTGGGAGTCGCTG
Suggested primer 2:CAGCAAGTTCTCAGCCAGGA