Insertion junction: CLIP2.002155_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002155
Chromosome:chromosome 13
Location:943782
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568050 SNRK2N (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase; snRK1 family in Chlamydomonas, subgroup 2 3'UTR
Cre13.g568100 (1 of 4) 3.4.21.19 - Glutamyl endopeptidase / V8 proteinase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTTGCCAGGTGCTGGCCAGCTAGCAAAATGCATCCAACTATCATCAG
Internal bar code:GACGGTCACACGTGAATACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2559
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGAGCTGAACGACTTTGT
Suggested primer 2:GGGGTTCATGTACTGCAGCT