Insertion junction: CLIP2.002159_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002159
Chromosome:chromosome 7
Location:5818807
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353500 CGLD5A ethylene response element DNA-binding domain containing protein; (1 of 1) PTHR31190:SF30 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 15-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGATGGCGCTGAAGCGGCAGCGGGAGGTGCGGCGGACACGGATGCGGC
Internal bar code:CAAAGGCTGACTACCTCATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1863
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCCACACATGCACTTG
Suggested primer 2:AGGCTGAGGCTGATGTTGAC