Insertion junction: CLIP2.002169_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.002169
Chromosome:chromosome 1
Location:6286232
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044650 (1 of 1) PF00168//PF17047 - C2 domain (C2) // Synaptotagmin-like mitochondrial-lipid-binding domain (SMP_LBD) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGACATGGCCAGCTCGGAGCTGAAAGTCGTGGAGGTTCGCAGCCCTCCT
Internal bar code:GGGGTTCACTGGACGACACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:148
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTTGCGCTTCTTGTTCA
Suggested primer 2:TCCACCAGCATCCAACCTTC