Insertion junction: CLIP2.002170_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.002170
Chromosome:chromosome 12
Location:2871512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g503000 GLPT1,GPT3 (1 of 1) 3.6.3.20 - Glycerol-3-phosphate-transporting ATPase; Glycerol-3-phosphate transporter, major facilitator superfamily 3'UTR
Cre12.g503050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGGAGAGGTGGCTGTAACATGTTGGGCGCGCGAAGGTGTACGCAGGG
Internal bar code:AGGTGGCGCCAAATTTGGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1382
LEAP-Seq percent confirming:80.6452
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGTTTCAGCAGTTCGGC
Suggested primer 2:TTTGGTGGCTTGGAGTGTGT