Insertion junction: CLIP2.002171_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002171
Chromosome:chromosome 7
Location:4465141
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g343400 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCCTGCACGTGCACCTCATCCAGATCCTCGTCGTGCGCAAGCGCCTT
Internal bar code:CGGGGTCTCGTAGATACGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:55
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGACCTGTGTCTTTCTCA
Suggested primer 2:AGCGTCAAAGAACTCGTCGT