Insertion junction: CLIP2.002180_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002180
Chromosome:chromosome 3
Location:1048459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148250 CGL58 (1 of 1) PTHR15856//PTHR15856:SF25 - PHD FINGER PROTEIN 20-RELATED // SUBFAMILY NOT NAMED; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGCACACCTGCTTGAGCACCCAGTCCAGCAGTTTGAAGTCGCGGTAG
Internal bar code:TCACCTGTAGCGGGGCCATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3047
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCGATGCTCGAGTACAG
Suggested primer 2:TTACTCCGAAGCTGCACAGG