Insertion junction: CLIP2.002182_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002182
Chromosome:chromosome 16
Location:7555271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683483 REX1-B,REX1B (1 of 1) PF14966 - DNA repair REX1-B (DNA_repr_REX1B); DNA repair protein and protein of unknown function CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAGGCAGATGGGTCAGCCGGCGGCATAGCGCAGGCGGCTGGCGGACA
Internal bar code:GATACAACCTGTACAGGTCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2348
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTCACTCCCGACAGGCTG
Suggested primer 2:TCTGCCACTTGTCTGTCGTC