Insertion junction: CLIP2.002191_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002191
Chromosome:chromosome 11
Location:2079788
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467755 SNE17 (1 of 10) PF13460 - NAD(P)H-binding (NAD_binding_10); Extended short-chain dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTCTGCCCTCCCCCGTGACCGGGCACGTTTGCGAACGACCTTTCCCC
Internal bar code:GCGTGAGAGCCTTTCTTATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:405
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGGCAATGTGATCCTG
Suggested primer 2:TTCAGTGGTCAGACGTTCGG