Insertion junction: CLIP2.002194_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002194
Chromosome:chromosome 10
Location:2362434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434800 (1 of 1) PF00515//PF02151//PF13414 - Tetratricopeptide repeat (TPR_1) // UvrB/uvrC motif (UVR) // TPR repeat (TPR_11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTGACACCATTGACTCCCAACATCCGCTCTGCCCTCCTCGCACTTCT
Internal bar code:TATTGTTAGCCGTATAGTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5275
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACCGACTTGGATTGCGA
Suggested primer 2:GAGGTGTGTTAACGAGGGGG