Insertion junction: CLIP2.002199_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002199
Chromosome:chromosome 16
Location:6446809
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g675100 CPLD53 Conserved in the Plant Lineage and Diatoms; (1 of 3) PTHR31319:SF10 - ZINC FINGER PROTEIN CONSTANS-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAAACTATTGGATGCTTTACTGTGCATCAAGTTTTATTGTTAGCAG
Internal bar code:TGTGTATCAGAAAGTGGCTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4280
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GGATTCGTGGTCCACAGTGT
Suggested primer 2:GCTCGCAGTAGTAGCCTCTG