Insertion junction: CLIP2.002202_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002202
Chromosome:chromosome 7
Location:2242437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327450 DNJ34 DnaJ-like protein; (1 of 1) PTHR24078//PTHR24078:SF201 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTCCTGCGGCTACAGACCCTTAAGTATTTGCGACAGGTGACAAACCGT
Internal bar code:TCTCCCGGGCAAATCTAGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3911
LEAP-Seq percent confirming:98.3471
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:GCACAAGTAGCGAATGAGCG
Suggested primer 2:CGACCGACCCTGAACTTTGA