Insertion junction: CLIP2.002202_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.002202
Chromosome:chromosome 7
Location:2242439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327450 DNJ34 DnaJ-like protein; (1 of 1) PTHR24078//PTHR24078:SF201 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACGAACAGTACTGCCAGGGGGGGGGGGGGTAGTTTCGACTGGGAAAGG
Internal bar code:CACTGCCCCTTACCGCTTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1222
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCGACCCTGAACTTTGA
Suggested primer 2:GCACAAGTAGCGAATGAGCG