Insertion junction: CLIP2.002205_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002205
Chromosome:chromosome 11
Location:1456642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469450 CGL124 (1 of 1) PTHR12225//PTHR12225:SF0 - ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN // PROTEASOMAL UBIQUITIN RECEPTOR ADRM1; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGTCTTGACCGCGACTCGGTGGGTGGAAGTGTTGAAGGGTCACGGGA
Internal bar code:GGAGTAATGAGAATTACCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1816
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTACGGTATGGATGCGG
Suggested primer 2:ACTCGTGCATCCATCCCATC