Insertion junction: CLIP2.002205_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.002205
Chromosome:chromosome 11
Location:1456646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469450 CGL124 (1 of 1) PTHR12225//PTHR12225:SF0 - ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN // PROTEASOMAL UBIQUITIN RECEPTOR ADRM1; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTTTCCCATTCGCCCGTTTACCCACCCCTTCGCACCCCTTTTCTTTCG
Internal bar code:GTATGGGCTGCGCTCGTTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:290
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCGTGCATCCATCCCATC
Suggested primer 2:GAGGTACGGTATGGATGCGG